AT2G02820 (MYB88, AtMYB88)

Aliases : MYB88, AtMYB88

Description : myb domain protein 88

Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0008963 (LandPlants) Phylogenetic Tree(s): OG_02_0008963_tree ,
OG_03_0007949 (SeedPlants) Phylogenetic Tree(s): OG_03_0007949_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02820

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00208260	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
AMTR_s00019p00201260	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00032p00057800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00032p00221670	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00036p00107460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00044p00189590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00076p00157170	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AT1G16490	MYB58, ATMYB58	myb domain protein 58	0.05	Archaeplastida
AT1G25340	MYB116, AtMYB116	myb domain protein 116	0.02	Archaeplastida
AT1G34670	AtMYB93, MYB93	myb domain protein 93	0.04	Archaeplastida
AT1G68320	BW62B, BW62C,...	myb domain protein 62	0.02	Archaeplastida
AT1G73410	MYB54, ATMYB54	myb domain protein 54	0.03	Archaeplastida
AT2G47460	ATMYB12, PFG1, MYB12	myb domain protein 12	0.04	Archaeplastida
AT3G12720	ATY53, ATMYB67, MYB67	myb domain protein 67	0.03	Archaeplastida
AT3G23250	ATMYB15, ATY19, MYB15	myb domain protein 15	0.02	Archaeplastida
AT3G46130	ATMYB48-1,...	myb domain protein 48	0.06	Archaeplastida
AT3G49690	MYB84, RAX3, ATMYB84	myb domain protein 84	0.02	Archaeplastida
AT5G10280	ATMYB64, ATMYB92, MYB92	myb domain protein 92	0.03	Archaeplastida
AT5G14340	AtMYB40, MYB40	myb domain protein 40	0.03	Archaeplastida
AT5G16600	MYB43, AtMYB43	myb domain protein 43	0.06	Archaeplastida
AT5G26660	MYB86, ATMYB86	myb domain protein 86	0.03	Archaeplastida
Cre03.g197100	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01009032001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01009280001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01013126001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01024353001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01035177001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_05115	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_15814	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_22064	No alias	transcription factor (MYB)	0.05	Archaeplastida
Gb_34882	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os03g56090.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_1261g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_278282g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_308669g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_37256g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_55123g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_6285g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_93111g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
Pp3c11_2650V3.1	No alias	myb domain protein 105	0.05	Archaeplastida
Pp3c9_10290V3.1	No alias	myb domain protein 55	0.03	Archaeplastida
Smo93784	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Solyc01g087130.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g067760.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g082040.3.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Solyc04g005710.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc04g077260.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc12g099140.2.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e008489_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e011944_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e022280_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e029600_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e035993_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010052	guard cell differentiation	IGI	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G02820 (MYB88, AtMYB88)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation