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  5. Solyc09g011780.3.1

Solyc09g011780.3.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000157 (SeedPlants) Phylogenetic Tree(s): OG_03_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g011780.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT2G25230 MYB100, AtMYB100 myb domain protein 100 0.02 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.01 Archaeplastida
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.03 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.01 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.01 Archaeplastida
AT5G40430 MYB22, AtMYB22 myb domain protein 22 0.02 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.01 Archaeplastida
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01024774001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027810001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g63680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10426233g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_4704g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g073640.4.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.01 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 LandPlants
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.01 LandPlants
MA_4704g0010 No alias transcription factor (MYB) 0.03 LandPlants
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 SeedPlants
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 SeedPlants
GSVIVT01024774001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 119 162
IPR001005 SANT/Myb 67 112
No external refs found!