Solyc09g007530.3.1


Description : Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica (sp|q7xtv7|hip1_orysj : 127.0)


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0000151 (LandPlants) Phylogenetic Tree(s): OG_02_0000151_tree ,
OG_03_0000175 (SeedPlants) Phylogenetic Tree(s): OG_03_0000175_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g007530.3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00244030 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00021p00189960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT2G37150 No alias RING/U-box superfamily protein 0.04 Archaeplastida
LOC_Os01g47740.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 Archaeplastida
LOC_Os04g10680.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Pp3c19_21510V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc12g005510.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008630_P002 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
AMTR_s00021p00189960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
AT2G37150 No alias RING/U-box superfamily protein 0.04 LandPlants
Pp3c19_21510V3.1 No alias RING/U-box superfamily protein 0.03 LandPlants
Zm00001e006754_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 LandPlants
Zm00001e041585_P003 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 LandPlants
AMTR_s00021p00189960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
AT2G37150 No alias RING/U-box superfamily protein 0.04 SeedPlants
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Zm00001e006754_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 487 530
No external refs found!