Solyc09g005070.1.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g005070.1.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G27740 RSL4 root hair defective 6-like 4 0.03 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.03 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
AT5G01305 No alias No description available 0.04 Archaeplastida
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01022111001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_06182 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.03 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.02 LandPlants
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 LandPlants
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 LandPlants
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 LandPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
GSVIVT01022111001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.03 LandPlants
Gb_27869 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g36740.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.02 LandPlants
MA_29186g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.02 LandPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.02 LandPlants
MA_88831g0010 No alias transcription factor (bHLH) 0.03 LandPlants
Mp6g21470.1 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.07 LandPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.09 LandPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.07 LandPlants
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.03 SeedPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
GSVIVT01022111001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
LOC_Os01g51140.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.05 SeedPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.03 SeedPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.04 SeedPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 29 70
No external refs found!