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  5. Solyc08g080580.4.1

Solyc08g080580.4.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000288 (LandPlants) Phylogenetic Tree(s): OG_02_0000288_tree ,
OG_03_0003085 (SeedPlants) Phylogenetic Tree(s): OG_03_0003085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080580.4.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00119p00105590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.03 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.02 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.04 Archaeplastida
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os01g12860.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_605711g0010 No alias Transcription factor MYB3R-4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.03 Archaeplastida
Pp3c13_8880V3.1 No alias myb domain protein 4r1 0.03 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e031356_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 LandPlants
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.03 LandPlants
GSVIVT01015370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
LOC_Os01g12860.1 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.05 LandPlants
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.03 LandPlants
Zm00001e016403_P001 No alias no hits & (original description: none) 0.07 LandPlants
Zm00001e031356_P001 No alias transcription factor (MYB) 0.03 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 106 152
IPR001005 SANT/Myb 158 201
IPR001005 SANT/Myb 57 100
No external refs found!