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  5. Solyc08g079100.3.1

Solyc08g079100.3.1


Description : transcription factor (YABBY)


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0006725 (LandPlants) Phylogenetic Tree(s): OG_02_0006725_tree ,
OG_03_0004255 (SeedPlants) Phylogenetic Tree(s): OG_03_0004255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g079100.3.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.06 Archaeplastida
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.06 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.1 Archaeplastida
Zm00001e012577_P001 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.06 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 LandPlants
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.04 LandPlants
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.03 LandPlants
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.05 LandPlants
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.04 LandPlants
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.06 LandPlants
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.04 LandPlants
Zm00001e012577_P001 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.06 LandPlants
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 SeedPlants
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.03 SeedPlants
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.03 SeedPlants
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.02 SeedPlants
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.03 SeedPlants
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.06 SeedPlants
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.04 SeedPlants
Zm00001e012577_P001 No alias transcription factor (YABBY) 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 17 179
No external refs found!