Solyc08g078100.1.1


Description : amino acid transporter (LAT)


Gene families : OG_01_0000896 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000896_tree ,
OG_02_0000706 (LandPlants) Phylogenetic Tree(s): OG_02_0000706_tree ,
OG_03_0001090 (SeedPlants) Phylogenetic Tree(s): OG_03_0001090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g078100.1.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00199050 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
Pp3c3_18940V3.1 No alias Amino acid permease family protein 0.02 Archaeplastida
Pp3c6_16980V3.1 No alias Amino acid permease family protein 0.02 Archaeplastida
Smo418809 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AMTR_s00048p00198660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 LandPlants
AMTR_s00048p00199050 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.05 LandPlants
MA_39613g0010 No alias amino acid transporter (LAT) 0.02 LandPlants
Pp3c3_18940V3.1 No alias Amino acid permease family protein 0.02 LandPlants
Pp3c6_16980V3.1 No alias Amino acid permease family protein 0.02 LandPlants
Smo418809 No alias Solute transport.carrier-mediated transport.APC... 0.02 LandPlants
Zm00001e015550_P001 No alias amino acid transporter (LAT) 0.02 LandPlants
AMTR_s00048p00198660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 SeedPlants
AMTR_s00048p00199050 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.06 SeedPlants
Solyc08g005540.2.1 No alias amino acid transporter (LAT) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 32 415
No external refs found!