Solyc08g068230.4.1


Description : Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana (sp|q8gz63|pp397_arath : 576.0)


Gene families : OG_01_0009354 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009354_tree ,
OG_02_0007114 (LandPlants) Phylogenetic Tree(s): OG_02_0007114_tree ,
OG_03_0006861 (SeedPlants) Phylogenetic Tree(s): OG_03_0006861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g068230.4.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.03 Archaeplastida
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Archaeplastida
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.1 Archaeplastida
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 Archaeplastida
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 Archaeplastida
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.02 LandPlants
AT5G21222 No alias protein kinase family protein 0.07 LandPlants
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 LandPlants
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.09 LandPlants
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.06 LandPlants
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 LandPlants
Pp3c16_9240V3.1 No alias protein kinase family protein 0.04 LandPlants
Zm00001e034408_P002 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 LandPlants
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.02 SeedPlants
AT5G21222 No alias protein kinase family protein 0.07 SeedPlants
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 SeedPlants
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.09 SeedPlants
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.05 SeedPlants
Zm00001e034408_P002 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 359 388
IPR002885 Pentatricopeptide_repeat 248 279
IPR002885 Pentatricopeptide_repeat 391 439
IPR002885 Pentatricopeptide_repeat 286 335
IPR002885 Pentatricopeptide_repeat 461 509
IPR002885 Pentatricopeptide_repeat 168 228
No external refs found!