AMTR_s00009p00226220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.175

Description : Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2-type)


Gene families : OG_01_0001845 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001845_tree ,
OG_02_0001690 (LandPlants) Phylogenetic Tree(s): OG_02_0001690_tree ,
OG_03_0003853 (SeedPlants) Phylogenetic Tree(s): OG_03_0003853_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00226220
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00063100 evm_27.TU.AmTr_v1... Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 Archaeplastida
LOC_Os10g39980.1 No alias putative silicon efflux transporter (LSI2) 0.08 Archaeplastida
Pp3c12_25560V3.1 No alias Divalent ion symporter 0.02 Archaeplastida
Pp3c3_31700V3.1 No alias Divalent ion symporter 0.07 Archaeplastida
Solyc06g036100.3.1 No alias putative silicon efflux transporter (LSI2) 0.06 Archaeplastida
Zm00001e023569_P001 No alias putative silicon efflux transporter (LSI2) 0.06 Archaeplastida
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 LandPlants
GSVIVT01035710001 No alias Solute transport.carrier-mediated transport.IT... 0.03 LandPlants
LOC_Os02g57620.1 No alias putative silicon efflux transporter (LSI2) 0.02 LandPlants
LOC_Os10g39980.1 No alias putative silicon efflux transporter (LSI2) 0.05 LandPlants
Pp3c12_25560V3.1 No alias Divalent ion symporter 0.02 LandPlants
Solyc06g036100.3.1 No alias putative silicon efflux transporter (LSI2) 0.06 LandPlants
Zm00001e023569_P001 No alias putative silicon efflux transporter (LSI2) 0.06 LandPlants
GSVIVT01035710001 No alias Solute transport.carrier-mediated transport.IT... 0.02 SeedPlants
LOC_Os02g57620.1 No alias putative silicon efflux transporter (LSI2) 0.02 SeedPlants
Zm00001e023569_P001 No alias putative silicon efflux transporter (LSI2) 0.06 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 18 498
No external refs found!