Solyc08g016801.1.1


Description : ALADIN scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0004325 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004325_tree ,
OG_02_0004827 (LandPlants) Phylogenetic Tree(s): OG_02_0004827_tree ,
OG_03_0005573 (SeedPlants) Phylogenetic Tree(s): OG_03_0005573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g016801.1.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00091430 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
LOC_Os12g03540.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
Mp5g23340.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida
Pp3c11_18220V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
AMTR_s00101p00091430 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 LandPlants
Gb_13199 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
LOC_Os12g03540.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 LandPlants
Mp5g23340.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.05 LandPlants
Pp3c11_18220V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 LandPlants
AMTR_s00101p00091430 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 SeedPlants
Gb_13199 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants
LOC_Os12g03540.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 SeedPlants
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 210 236
No external refs found!