Solyc08g015960.3.1

Description : Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica (sp|q9zts1|sym_orysj : 141.0)

Gene families : OG_01_0001682 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001682_tree ,
OG_02_0007870 (LandPlants) Phylogenetic Tree(s): OG_02_0007870_tree ,
OG_03_0009675 (SeedPlants) Phylogenetic Tree(s): OG_03_0009675_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g015960.3.1
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
AT3G59980	No alias	Nucleic acid-binding, OB-fold-like protein	0.07	Archaeplastida
Cpa\|evm.model.tig00000553.11	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cpa\|evm.model.tig00021070.69	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cre01.g046652	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.07	Archaeplastida
Cre03.g145967	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cre08.g364650	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	Archaeplastida
GSVIVT01038277001	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica	0.1	Archaeplastida
Mp1g24710.1	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp....	0.06	Archaeplastida
AT3G59980	No alias	Nucleic acid-binding, OB-fold-like protein	0.07	LandPlants
GSVIVT01038277001	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica	0.08	LandPlants
Mp1g24710.1	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp....	0.06	LandPlants
AT3G59980	No alias	Nucleic acid-binding, OB-fold-like protein	0.07	SeedPlants
GSVIVT01038277001	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica	0.08	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002547	tRNA-bd_dom	125	219

External Links

No external refs found!