Solyc08g007090.3.1


Description : Expansin-like B1 OS=Oryza sativa subsp. japonica (sp|q850k7|exlb1_orysj : 86.7)


Gene families : OG_01_0004259 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004259_tree ,
OG_02_0002947 (LandPlants) Phylogenetic Tree(s): OG_02_0002947_tree ,
OG_03_0001704 (SeedPlants) Phylogenetic Tree(s): OG_03_0001704_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g007090.3.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00146900 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.07 Archaeplastida
AMTR_s00002p00195390 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.04 Archaeplastida
GSVIVT01004469001 No alias Expansin-like B1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01004595001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 Archaeplastida
GSVIVT01005917001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.07 Archaeplastida
GSVIVT01013208001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.06 Archaeplastida
Gb_10700 No alias beta-like-class expansin 0.01 Archaeplastida
Gb_10701 No alias beta-like-class expansin 0.05 Archaeplastida
Gb_10702 No alias beta-like-class expansin 0.07 Archaeplastida
Gb_10703 No alias beta-like-class expansin 0.07 Archaeplastida
MA_41212g0010 No alias beta-like-class expansin 0.04 Archaeplastida
Solyc06g060970.2.1 No alias beta-like-class expansin 0.05 Archaeplastida
Solyc08g077900.3.1 No alias beta-like-class expansin 0.04 Archaeplastida
AMTR_s00002p00146900 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.07 LandPlants
AMTR_s00002p00195390 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 LandPlants
GSVIVT01004469001 No alias Expansin-like B1 OS=Arabidopsis thaliana 0.01 LandPlants
GSVIVT01004595001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 LandPlants
GSVIVT01005915001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 LandPlants
GSVIVT01005917001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.07 LandPlants
GSVIVT01013208001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.05 LandPlants
Gb_10700 No alias beta-like-class expansin 0.01 LandPlants
Gb_10701 No alias beta-like-class expansin 0.04 LandPlants
Gb_10702 No alias beta-like-class expansin 0.05 LandPlants
Gb_10703 No alias beta-like-class expansin 0.05 LandPlants
LOC_Os07g31390.1 No alias beta-like-class expansin 0.01 LandPlants
MA_41212g0010 No alias beta-like-class expansin 0.04 LandPlants
Solyc06g060970.2.1 No alias beta-like-class expansin 0.05 LandPlants
Solyc08g077900.3.1 No alias beta-like-class expansin 0.03 LandPlants
AMTR_s00002p00146900 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.06 SeedPlants
AMTR_s00002p00195390 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 SeedPlants
GSVIVT01005915001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 SeedPlants
GSVIVT01005917001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.06 SeedPlants
GSVIVT01013208001 No alias Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.04 SeedPlants
Gb_10701 No alias beta-like-class expansin 0.03 SeedPlants
Gb_10702 No alias beta-like-class expansin 0.04 SeedPlants
Gb_10703 No alias beta-like-class expansin 0.04 SeedPlants
MA_41212g0010 No alias beta-like-class expansin 0.01 SeedPlants
Solyc06g060970.2.1 No alias beta-like-class expansin 0.04 SeedPlants
Solyc08g077900.3.1 No alias beta-like-class expansin 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!