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  5. Solyc07g062660.4.1

Solyc07g062660.4.1


Description : transcriptional co-activator (BET/GTE)


Gene families : OG_01_0000250 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000250_tree ,
OG_02_0000330 (LandPlants) Phylogenetic Tree(s): OG_02_0000330_tree ,
OG_03_0000655 (SeedPlants) Phylogenetic Tree(s): OG_03_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062660.4.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00046p00231370 evm_27.TU.AmTr_v1... Transcription factor GTE7 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G06230 GTE4 global transcription factor group E4 0.04 Archaeplastida
Cre01.g048900 No alias No description available 0.02 Archaeplastida
Cre08.g367300 No alias Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01001835001 No alias Transcription factor GTE8 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01021322001 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01034328001 No alias Transcription factor GTE1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038522001 No alias Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Gb_30202 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os01g11580.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.08 Archaeplastida
LOC_Os02g38980.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429630g0020 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10435152g0020 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
MA_87057g0010 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.06 Archaeplastida
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.04 Archaeplastida
Zm00001e006897_P002 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e021805_P005 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
Zm00001e026041_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Zm00001e029260_P001 No alias transcriptional co-activator (BET/GTE) 0.09 Archaeplastida
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 LandPlants
AMTR_s00046p00231370 evm_27.TU.AmTr_v1... Transcription factor GTE7 OS=Arabidopsis thaliana 0.02 LandPlants
AT1G06230 GTE4 global transcription factor group E4 0.05 LandPlants
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.05 LandPlants
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.05 LandPlants
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.07 LandPlants
GSVIVT01021322001 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01038522001 No alias Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.02 LandPlants
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
LOC_Os01g11580.1 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.07 LandPlants
LOC_Os02g38980.1 No alias transcriptional co-activator (BET/GTE) 0.02 LandPlants
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_10429630g0020 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.04 LandPlants
MA_10435152g0020 No alias transcriptional co-activator (BET/GTE) 0.05 LandPlants
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.04 LandPlants
MA_87057g0010 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.01 LandPlants
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 LandPlants
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.05 LandPlants
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.03 LandPlants
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.06 LandPlants
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
Zm00001e021805_P005 No alias transcriptional co-activator (BET/GTE) 0.03 LandPlants
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.05 LandPlants
Zm00001e026041_P001 No alias transcriptional co-activator (BET/GTE) 0.04 LandPlants
Zm00001e029260_P001 No alias transcriptional co-activator (BET/GTE) 0.08 LandPlants
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 SeedPlants
AMTR_s00046p00231370 evm_27.TU.AmTr_v1... Transcription factor GTE7 OS=Arabidopsis thaliana 0.02 SeedPlants
AT1G06230 GTE4 global transcription factor group E4 0.04 SeedPlants
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.05 SeedPlants
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.07 SeedPlants
GSVIVT01038522001 No alias Transcription factor GTE7 OS=Arabidopsis thaliana 0.02 SeedPlants
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.02 SeedPlants
LOC_Os01g11580.1 No alias transcriptional co-activator (BET/GTE) 0.03 SeedPlants
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.06 SeedPlants
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.04 SeedPlants
MA_87057g0010 No alias transcriptional co-activator (BET/GTE) 0.03 SeedPlants
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.06 SeedPlants
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.03 SeedPlants
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.02 SeedPlants
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.04 SeedPlants
Zm00001e024861_P001 No alias transcriptional co-activator (BET/GTE) 0.01 SeedPlants
Zm00001e026041_P001 No alias transcriptional co-activator (BET/GTE) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 396 480
IPR027353 NET_dom 586 647
No external refs found!