Solyc07g049480.3.1


Description : component CPSF73/Ysh1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. nuclease CPSF73-I


Gene families : OG_01_0001402 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001402_tree ,
OG_02_0004701 (LandPlants) Phylogenetic Tree(s): OG_02_0004701_tree ,
OG_03_0005331 (SeedPlants) Phylogenetic Tree(s): OG_03_0005331_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g049480.3.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.05 Archaeplastida
Gb_26095 No alias component CPSF73-II of Cleavage and Polyadenylation... 0.06 Archaeplastida
MA_121141g0010 No alias Cleavage and polyadenylation specificity factor subunit... 0.03 Archaeplastida
MA_45580g0010 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.04 Archaeplastida
Mp2g23780.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 Archaeplastida
Pp3c5_16690V3.1 No alias cleavage and polyadenylation specificity factor 73 kDa subunit-II 0.04 Archaeplastida
Smo234671 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.03 Archaeplastida
Smo234972 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 Archaeplastida
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.06 Archaeplastida
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.06 LandPlants
MA_45580g0010 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.04 LandPlants
Mp2g23780.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.01 LandPlants
Smo234671 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 LandPlants
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.06 LandPlants
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.05 SeedPlants
MA_45580g0010 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.03 SeedPlants
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 35 201
IPR011108 RMMBL 395 445
IPR021718 CPSF73-100_C 489 689
IPR022712 Beta_Casp 259 380
No external refs found!