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  5. Solyc07g045000.4.1

Solyc07g045000.4.1


Description : Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana (sp|q700d9|mybf_arath : 89.7)


Gene families : OG_01_0000027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000027_tree ,
OG_02_0000101 (LandPlants) Phylogenetic Tree(s): OG_02_0000101_tree ,
OG_03_0000391 (SeedPlants) Phylogenetic Tree(s): OG_03_0000391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g045000.4.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.07 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.05 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
GSVIVT01025502001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01028403001 No alias Nutrient uptake.phosphorus assimilation.phosphate... 0.03 Archaeplastida
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_08427 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_201937g0020 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_335624g0020 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_52379g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_6619111g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c12_11150V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AT2G02060 No alias Homeodomain-like superfamily protein 0.02 LandPlants
AT4G04605 No alias No description available 0.04 LandPlants
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.03 LandPlants
Gb_08427 No alias G2-like GARP transcription factor 0.05 LandPlants
Gb_25992 No alias G2-like GARP transcription factor 0.02 LandPlants
Gb_40510 No alias G2-like GARP transcription factor 0.03 LandPlants
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.02 LandPlants
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 LandPlants
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.05 LandPlants
MA_10432937g0010 No alias G2-like GARP transcription factor 0.04 LandPlants
MA_138039g0010 No alias G2-like GARP transcription factor 0.04 LandPlants
MA_52379g0010 No alias G2-like GARP transcription factor 0.03 LandPlants
MA_6619111g0010 No alias G2-like GARP transcription factor 0.02 LandPlants
Pp3c23_11030V3.1 No alias Homeodomain-like superfamily protein 0.01 LandPlants
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 LandPlants
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.05 LandPlants
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 LandPlants
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.03 LandPlants
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.02 LandPlants
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.02 LandPlants
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.04 LandPlants
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.04 LandPlants
AT2G02060 No alias Homeodomain-like superfamily protein 0.02 SeedPlants
AT4G04605 No alias No description available 0.03 SeedPlants
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.02 SeedPlants
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 SeedPlants
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.05 SeedPlants
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.01 SeedPlants
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.01 SeedPlants
MA_52379g0010 No alias G2-like GARP transcription factor 0.03 SeedPlants
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.04 SeedPlants
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.02 SeedPlants
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 28 78
No external refs found!