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  5. Solyc07g041650.3.1

Solyc07g041650.3.1


Description : Exopolygalacturonase (Fragment) OS=Platanus acerifolia (sp|q6h9k0|pglr2_plaac : 305.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 240.1)


Gene families : OG_01_0000535 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000535_tree ,
OG_02_0000281 (LandPlants) Phylogenetic Tree(s): OG_02_0000281_tree ,
OG_03_0000124 (SeedPlants) Phylogenetic Tree(s): OG_03_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g041650.3.1
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030020001 No alias No description available 0.03 Archaeplastida
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.04 Archaeplastida
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.03 LandPlants
GSVIVT01030020001 No alias No description available 0.03 LandPlants
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.02 LandPlants
GSVIVT01035102001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.02 LandPlants
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 LandPlants
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 LandPlants
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.03 SeedPlants
GSVIVT01030020001 No alias No description available 0.03 SeedPlants
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.02 SeedPlants
GSVIVT01035102001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.02 SeedPlants
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 SeedPlants
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 54 369
No external refs found!