1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g041020.3.1

Solyc07g041020.3.1


Description : UBP1-associated proteins 1C OS=Arabidopsis thaliana (sp|o64571|uba1c_arath : 119.0)


Gene families : OG_01_0005965 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005965_tree ,
OG_02_0007745 (LandPlants) Phylogenetic Tree(s): OG_02_0007745_tree ,
OG_03_0008977 (SeedPlants) Phylogenetic Tree(s): OG_03_0008977_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g041020.3.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00068870 evm_27.TU.AmTr_v1... UBP1-associated proteins 1C OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G22100 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000383.21 No alias No description available 0.05 Archaeplastida
Cre17.g701050 No alias No description available 0.07 Archaeplastida
Gb_25299 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.11 Archaeplastida
LOC_Os01g40110.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_10435781g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c3_280V3.1 No alias zinc ion binding 0.03 Archaeplastida
Zm00001e027770_P001 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.15 Archaeplastida
AMTR_s00146p00068870 evm_27.TU.AmTr_v1... UBP1-associated proteins 1C OS=Arabidopsis thaliana 0.04 LandPlants
Gb_25299 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.07 LandPlants
LOC_Os01g40110.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.07 LandPlants
MA_10435781g0010 No alias no hits & (original description: none) 0.06 LandPlants
Pp3c3_280V3.1 No alias zinc ion binding 0.03 LandPlants
Zm00001e027770_P001 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.13 LandPlants
AMTR_s00146p00068870 evm_27.TU.AmTr_v1... UBP1-associated proteins 1C OS=Arabidopsis thaliana 0.04 SeedPlants
Gb_25299 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.06 SeedPlants
LOC_Os01g40110.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.07 SeedPlants
MA_10435781g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Zm00001e027770_P001 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.13 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014898 Znf_C2H2_LYAR 30 57
No external refs found!