AMTR_s00009p00214490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.148

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein


Gene families : OG_01_0001573 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001573_tree ,
OG_02_0002278 (LandPlants) Phylogenetic Tree(s): OG_02_0002278_tree ,
OG_03_0002600 (SeedPlants) Phylogenetic Tree(s): OG_03_0002600_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00214490
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_22880V3.1 No alias ubiquitin-conjugating enzyme 5 0.02 Archaeplastida
Zm00001e000387_P004 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida
Zm00001e004677_P001 No alias ubiquitin-conjugating E2 protein 0.04 Archaeplastida
Zm00001e038978_P001 No alias ubiquitin-conjugating E2 protein 0.04 Archaeplastida
Pp3c13_22880V3.1 No alias ubiquitin-conjugating enzyme 5 0.02 LandPlants
Solyc01g094810.3.1 No alias ubiquitin-conjugating E2 protein 0.01 LandPlants
Zm00001e000387_P004 No alias ubiquitin-conjugating E2 protein 0.02 LandPlants
Zm00001e004677_P001 No alias ubiquitin-conjugating E2 protein 0.03 LandPlants
Zm00001e038978_P001 No alias ubiquitin-conjugating E2 protein 0.03 LandPlants
Solyc01g094810.3.1 No alias ubiquitin-conjugating E2 protein 0.01 SeedPlants
Zm00001e000387_P004 No alias ubiquitin-conjugating E2 protein 0.02 SeedPlants
Zm00001e004677_P001 No alias ubiquitin-conjugating E2 protein 0.03 SeedPlants
Zm00001e038978_P001 No alias ubiquitin-conjugating E2 protein 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 12 142
No external refs found!