Solyc07g015930.3.1


Description : methylation reader (MBD1-4|12)


Gene families : OG_01_0001540 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001540_tree ,
OG_02_0001399 (LandPlants) Phylogenetic Tree(s): OG_02_0001399_tree ,
OG_03_0001916 (SeedPlants) Phylogenetic Tree(s): OG_03_0001916_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g015930.3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Solyc10g018470.1.1 No alias methylation reader (MBD1-4|12) 0.04 Archaeplastida
Solyc05g041160.3.1 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc10g018470.1.1 No alias methylation reader (MBD1-4|12) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011124 Znf_CW 20 69
IPR001739 Methyl_CpG_DNA-bd 85 149
No external refs found!