Solyc07g006820.4.1


Description : component HAF/TAF1 of SAGA transcription co-activator complex. component HAF/TAF1 of TFIId basal transcription regulation complex. protein kinase (TAF)


Gene families : OG_01_0002996 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002996_tree ,
OG_02_0003348 (LandPlants) Phylogenetic Tree(s): OG_02_0003348_tree ,
OG_03_0005183 (SeedPlants) Phylogenetic Tree(s): OG_03_0005183_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006820.4.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00132750 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.07 Archaeplastida
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.18 Archaeplastida
AT3G19040 TAF1B, TAF1, HAF2 histone acetyltransferase of the TAFII250 family 2 0.04 Archaeplastida
Cpa|evm.model.tig00020903.20 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Cre10.g425501 No alias Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.04 Archaeplastida
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.12 Archaeplastida
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.08 Archaeplastida
MA_854546g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.03 Archaeplastida
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.09 Archaeplastida
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.02 Archaeplastida
Smo409957 No alias Protein modification.phosphorylation.atypical kinase... 0.06 Archaeplastida
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.12 Archaeplastida
AMTR_s00078p00132750 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.08 LandPlants
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.17 LandPlants
AT3G19040 TAF1B, TAF1, HAF2 histone acetyltransferase of the TAFII250 family 2 0.04 LandPlants
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.11 LandPlants
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.07 LandPlants
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.03 LandPlants
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.09 LandPlants
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.01 LandPlants
Smo409957 No alias Protein modification.phosphorylation.atypical kinase... 0.05 LandPlants
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.1 LandPlants
AMTR_s00078p00132750 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.07 SeedPlants
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.17 SeedPlants
AT3G19040 TAF1B, TAF1, HAF2 histone acetyltransferase of the TAFII250 family 2 0.03 SeedPlants
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.1 SeedPlants
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.07 SeedPlants
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 630 700
IPR041670 Znf-CCHC_6 1373 1392
IPR009067 TAF_II_230-bd 1 29
IPR022591 TFIID_sub1_DUF3591 545 1114
No external refs found!