AT1G77600


Description : ARM repeat superfamily protein


Gene families : OG_01_0000410 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000410_tree ,
OG_02_0002118 (LandPlants) Phylogenetic Tree(s): OG_02_0002118_tree ,
OG_03_0002144 (SeedPlants) Phylogenetic Tree(s): OG_03_0002144_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G77600
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00192140 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.05 Archaeplastida
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 Archaeplastida
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.05 Archaeplastida
GSVIVT01008876001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.11 Archaeplastida
GSVIVT01023587001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.05 Archaeplastida
Gb_02487 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Gb_09525 No alias cohesin cofactor (PDS5) 0.06 Archaeplastida
Gb_23673 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
LOC_Os01g64900.1 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.06 Archaeplastida
MA_10093130g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426926g0010 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
MA_10434055g0010 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
MA_10434304g0010 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
MA_10434588g0010 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
MA_214607g0010 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
MA_25261g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g13850.1 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Pp3c10_24900V3.1 No alias binding 0.03 Archaeplastida
Pp3c20_23000V3.1 No alias binding 0.02 Archaeplastida
Pp3c23_10270V3.1 No alias binding 0.05 Archaeplastida
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.05 Archaeplastida
Zm00001e007658_P001 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Zm00001e015094_P002 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Zm00001e019139_P001 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Zm00001e019144_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022962_P003 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Zm00001e041168_P001 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
AMTR_s00017p00192140 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 LandPlants
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 LandPlants
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.04 LandPlants
GSVIVT01008876001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.1 LandPlants
LOC_Os01g64900.1 No alias cohesin cofactor (PDS5) 0.02 LandPlants
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.05 LandPlants
MA_10434588g0010 No alias cohesin cofactor (PDS5) 0.02 LandPlants
MA_214607g0010 No alias cohesin cofactor (PDS5) 0.02 LandPlants
Pp3c10_24900V3.1 No alias binding 0.02 LandPlants
Pp3c20_23000V3.1 No alias binding 0.02 LandPlants
Pp3c23_10270V3.1 No alias binding 0.04 LandPlants
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.04 LandPlants
Zm00001e019139_P001 No alias cohesin cofactor (PDS5) 0.03 LandPlants
Zm00001e019144_P001 No alias no hits & (original description: none) 0.03 LandPlants
AMTR_s00017p00192140 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 SeedPlants
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 SeedPlants
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.04 SeedPlants
GSVIVT01008876001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.1 SeedPlants
LOC_Os01g64900.1 No alias cohesin cofactor (PDS5) 0.02 SeedPlants
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.04 SeedPlants
MA_10434588g0010 No alias cohesin cofactor (PDS5) 0.02 SeedPlants
MA_214607g0010 No alias cohesin cofactor (PDS5) 0.02 SeedPlants
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.04 SeedPlants
Zm00001e019139_P001 No alias cohesin cofactor (PDS5) 0.03 SeedPlants
Zm00001e019144_P001 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!