Solyc06g084620.1.1


Description : pectin methylesterase


Gene families : OG_01_0014060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0014060_tree ,
OG_02_0013989 (LandPlants) Phylogenetic Tree(s): OG_02_0013989_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084620.1.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT2G47030 VGDH1 Plant invertase/pectin methylesterase inhibitor superfamily 0.14 Archaeplastida
AT2G47040 VGD1 Plant invertase/pectin methylesterase inhibitor superfamily 0.11 Archaeplastida
AT2G47050 No alias Plant invertase/pectin methylesterase inhibitor... 0.08 Archaeplastida
AT3G62170 VGDH2 VANGUARD 1 homolog 2 0.06 Archaeplastida
AT3G62180 No alias Plant invertase/pectin methylesterase inhibitor... 0.11 Archaeplastida
AT2G47030 VGDH1 Plant invertase/pectin methylesterase inhibitor superfamily 0.12 LandPlants
AT2G47040 VGD1 Plant invertase/pectin methylesterase inhibitor superfamily 0.09 LandPlants
AT2G47050 No alias Plant invertase/pectin methylesterase inhibitor... 0.1 LandPlants
AT3G62170 VGDH2 VANGUARD 1 homolog 2 0.04 LandPlants
AT3G62180 No alias Plant invertase/pectin methylesterase inhibitor... 0.09 LandPlants
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.07 SeedPlants
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.1 SeedPlants
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.11 SeedPlants
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.11 SeedPlants
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
AT3G14310 ATPME3, PME3 pectin methylesterase 3 0.01 SeedPlants
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.09 SeedPlants
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 SeedPlants
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.09 SeedPlants
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.08 SeedPlants
Gb_10522 No alias pectin methylesterase 0.02 SeedPlants
Gb_21388 No alias pectin methylesterase 0.02 SeedPlants
LOC_Os02g54190.1 No alias pectin methylesterase 0.01 SeedPlants
LOC_Os04g38560.1 No alias pectin methylesterase 0.07 SeedPlants
LOC_Os08g34910.1 No alias pectin methylesterase 0.11 SeedPlants
LOC_Os09g26360.1 No alias pectin methylesterase 0.03 SeedPlants
MA_10377619g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_96515g0010 No alias pectin methylesterase 0.01 SeedPlants
Solyc01g057220.3.1 No alias pectin methylesterase 0.03 SeedPlants
Zm00001e004056_P002 No alias no hits & (original description: none) 0.09 SeedPlants
Zm00001e007917_P002 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e009863_P001 No alias pectin methylesterase 0.1 SeedPlants
Zm00001e022184_P001 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e034231_P001 No alias pectin methylesterase 0.12 SeedPlants
Zm00001e041006_P001 No alias pectin methylesterase 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 250 546
IPR006501 Pectinesterase_inhib_dom 45 195
No external refs found!