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  5. Solyc06g073340.3.1

Solyc06g073340.3.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_01_0000511 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000511_tree ,
OG_02_0001468 (LandPlants) Phylogenetic Tree(s): OG_02_0001468_tree ,
OG_03_0001396 (SeedPlants) Phylogenetic Tree(s): OG_03_0001396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g073340.3.1
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT1G05890 ARI5, ATARI5 RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031904001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Pp3c23_14640V3.1 No alias IBR domain-containing protein 0.04 Archaeplastida
Pp3c24_15470V3.1 No alias IBR domain-containing protein 0.03 Archaeplastida
Pp3c4_29960V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Zm00001e000911_P002 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Archaeplastida
Zm00001e003726_P005 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Zm00001e011364_P001 No alias component MED25 of MEDIATOR transcription co-activator... 0.03 Archaeplastida
AMTR_s00066p00073650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT1G05890 ARI5, ATARI5 RING/U-box superfamily protein 0.03 LandPlants
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
LOC_Os04g41470.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 LandPlants
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 LandPlants
Pp3c23_14640V3.1 No alias IBR domain-containing protein 0.04 LandPlants
Pp3c24_15470V3.1 No alias IBR domain-containing protein 0.03 LandPlants
Smo180454 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00066p00073650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
AT1G05890 ARI5, ATARI5 RING/U-box superfamily protein 0.03 SeedPlants
GSVIVT01003757001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
GSVIVT01010742001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
LOC_Os04g41470.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 SeedPlants
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 204 266
IPR002867 IBR_dom 283 331
No external refs found!