Solyc06g072270.4.1


Description : E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana (sp|q8lpn7|rng1l_arath : 154.0)


Gene families : OG_01_0004445 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004445_tree ,
OG_02_0004971 (LandPlants) Phylogenetic Tree(s): OG_02_0004971_tree ,
OG_03_0005382 (SeedPlants) Phylogenetic Tree(s): OG_03_0005382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072270.4.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00120880 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G64570 DUO3 Homeodomain-like superfamily protein 0.05 Archaeplastida
Cre09.g396661 No alias No description available 0.06 Archaeplastida
LOC_Os03g46950.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_100454g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_42067g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g01390.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c26_140V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Zm00001e033914_P002 No alias no hits & (original description: none) 0.08 Archaeplastida
AT1G64570 DUO3 Homeodomain-like superfamily protein 0.04 LandPlants
LOC_Os03g46950.1 No alias no hits & (original description: none) 0.05 LandPlants
Mp1g01390.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e033914_P002 No alias no hits & (original description: none) 0.05 LandPlants
AT1G64570 DUO3 Homeodomain-like superfamily protein 0.04 SeedPlants
LOC_Os03g46950.1 No alias no hits & (original description: none) 0.05 SeedPlants
MA_100454g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e033914_P002 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 1436 1464
IPR001841 Znf_RING 1592 1634
No external refs found!