Solyc06g069210.3.1


Description : golgin (CASP)


Gene families : OG_01_0003849 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003849_tree ,
OG_02_0004723 (LandPlants) Phylogenetic Tree(s): OG_02_0004723_tree ,
OG_03_0007543 (SeedPlants) Phylogenetic Tree(s): OG_03_0007543_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g069210.3.1
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00085700 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.Golgi... 0.02 Archaeplastida
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.09 Archaeplastida
Cre04.g223900 No alias No description available 0.02 Archaeplastida
Cre08.g382650 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.04 Archaeplastida
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.06 Archaeplastida
LOC_Os03g50300.1 No alias golgin (CASP) 0.04 Archaeplastida
Pp3c25_10040V3.1 No alias CCAAT-displacement protein alternatively spliced product 0.04 Archaeplastida
Smo173154 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
Zm00001e012195_P001 No alias golgin (CASP) 0.04 Archaeplastida
AMTR_s00138p00085700 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.Golgi... 0.02 LandPlants
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.07 LandPlants
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.06 LandPlants
LOC_Os03g50300.1 No alias golgin (CASP) 0.04 LandPlants
MA_4188g0010 No alias golgin (CASP) 0.02 LandPlants
Smo173154 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 LandPlants
Zm00001e012195_P001 No alias golgin (CASP) 0.04 LandPlants
AMTR_s00138p00085700 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.Golgi... 0.02 SeedPlants
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.07 SeedPlants
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.06 SeedPlants
LOC_Os03g50300.1 No alias golgin (CASP) 0.04 SeedPlants
MA_4188g0010 No alias golgin (CASP) 0.02 SeedPlants
Zm00001e012195_P001 No alias golgin (CASP) 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030173 integral component of Golgi membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012955 CASP_C 435 661
No external refs found!