Solyc06g068610.3.1


Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG_01_0001266 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001266_tree ,
OG_02_0000955 (LandPlants) Phylogenetic Tree(s): OG_02_0000955_tree ,
OG_03_0004777 (SeedPlants) Phylogenetic Tree(s): OG_03_0004777_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g068610.3.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
LOC_Os12g39090.2 No alias component ADA1 of SAGA transcription co-activator complex 0.04 Archaeplastida
MA_7243g0030 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Pp3c3_34380V3.1 No alias No annotation 0.05 Archaeplastida
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.04 Archaeplastida
AT2G24530 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 LandPlants
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 LandPlants
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 LandPlants
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 LandPlants
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 LandPlants
LOC_Os12g39090.2 No alias component ADA1 of SAGA transcription co-activator complex 0.04 LandPlants
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 LandPlants
Pp3c3_34330V3.1 No alias No annotation 0.03 LandPlants
Pp3c3_34380V3.1 No alias No annotation 0.05 LandPlants
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.04 LandPlants
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 SeedPlants
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 SeedPlants
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 SeedPlants
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 5 335
No external refs found!