Solyc06g068140.3.1


Description : methylation reader (MBD10-11)


Gene families : OG_01_0003057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003057_tree ,
OG_02_0002066 (LandPlants) Phylogenetic Tree(s): OG_02_0002066_tree ,
OG_03_0002151 (SeedPlants) Phylogenetic Tree(s): OG_03_0002151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g068140.3.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015565001 No alias Methyl-CpG-binding domain-containing protein 10... 0.03 Archaeplastida
GSVIVT01017330001 No alias Methyl-CpG-binding domain-containing protein 10... 0.04 Archaeplastida
Solyc12g009590.2.1 No alias methylation reader (MBD10-11) 0.04 Archaeplastida
Zm00001e012390_P001 No alias methylation reader (MBD10-11) 0.03 Archaeplastida
GSVIVT01015565001 No alias Methyl-CpG-binding domain-containing protein 10... 0.03 LandPlants
GSVIVT01017330001 No alias Methyl-CpG-binding domain-containing protein 10... 0.04 LandPlants
Solyc12g009590.2.1 No alias methylation reader (MBD10-11) 0.04 LandPlants
Zm00001e003265_P002 No alias methylation reader (MBD10-11) 0.02 LandPlants
Zm00001e012390_P001 No alias methylation reader (MBD10-11) 0.03 LandPlants
GSVIVT01015565001 No alias Methyl-CpG-binding domain-containing protein 10... 0.03 SeedPlants
GSVIVT01017330001 No alias Methyl-CpG-binding domain-containing protein 10... 0.04 SeedPlants
Gb_14552 No alias methylation reader (MBD10-11) 0.02 SeedPlants
Solyc12g009590.2.1 No alias methylation reader (MBD10-11) 0.04 SeedPlants
Zm00001e003265_P002 No alias methylation reader (MBD10-11) 0.02 SeedPlants
Zm00001e004995_P005 No alias methylation reader (MBD10-11) 0.02 SeedPlants
Zm00001e012390_P001 No alias methylation reader (MBD10-11) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 16 81
No external refs found!