Solyc06g066810.3.1


Description : catalytic component of Katanin ATP-dependent microtubule severing complex


Gene families : OG_01_0003594 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003594_tree ,
OG_02_0004912 (LandPlants) Phylogenetic Tree(s): OG_02_0004912_tree ,
OG_03_0007322 (SeedPlants) Phylogenetic Tree(s): OG_03_0007322_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g066810.3.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00082000 evm_27.TU.AmTr_v1... Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 Archaeplastida
AT1G80350 AAA1, LUE1, FTR,... P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Cre10.g427600 No alias Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.01 Archaeplastida
AMTR_s00122p00082000 evm_27.TU.AmTr_v1... Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 LandPlants
AT1G80350 AAA1, LUE1, FTR,... P-loop containing nucleoside triphosphate hydrolases... 0.02 LandPlants
AMTR_s00122p00082000 evm_27.TU.AmTr_v1... Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 SeedPlants
MA_10429958g0030 No alias Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 270 407
IPR041569 AAA_lid_3 429 469
IPR015415 Vps4_C 470 516
No external refs found!