Solyc06g060960.3.1


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0001628 (LandPlants) Phylogenetic Tree(s): OG_02_0001628_tree ,
OG_03_0001153 (SeedPlants) Phylogenetic Tree(s): OG_03_0001153_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g060960.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00147870 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
AT2G22740 SDG23, SUVH6 SU(VAR)3-9 homolog 6 0.06 Archaeplastida
AT2G24740 SUVH8, SDG21 SET domain group 21 0.03 Archaeplastida
Cre02.g089200 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 Archaeplastida
GSVIVT01005913001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
GSVIVT01027942001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
Gb_40999 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Gb_41073 No alias class V/Su(var) histone methyltransferase component of... 0.06 Archaeplastida
LOC_Os01g59620.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os05g41172.2 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os09g19830.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Solyc09g090810.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Solyc10g077070.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e031994_P003 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
GSVIVT01005913001 No alias Chromatin organisation.histone modifications.histone... 0.02 LandPlants
LOC_Os09g19830.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 LandPlants
MA_106068g0010 No alias class V/Su(var) histone methyltransferase component of... 0.01 LandPlants
GSVIVT01005913001 No alias Chromatin organisation.histone modifications.histone... 0.02 SeedPlants
LOC_Os09g19830.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 SeedPlants
MA_106068g0010 No alias class V/Su(var) histone methyltransferase component of... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 786 882
IPR001214 SET_dom 901 1025
IPR003105 SRA_YDG 604 761
No external refs found!