Solyc06g051800.3.1


Description : alpha-class expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g051800.3.1
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01504 No alias alpha-class expansin 0.04 Archaeplastida
Gb_01505 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07437 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_184474g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp4g22180.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.03 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e003887_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
AT3G29030 EXP5, ATHEXP... expansin A5 0.02 LandPlants
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 LandPlants
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Gb_01502 No alias alpha-class expansin 0.02 LandPlants
Gb_01504 No alias alpha-class expansin 0.04 LandPlants
Gb_01505 No alias alpha-class expansin 0.03 LandPlants
Gb_06127 No alias alpha-class expansin 0.03 LandPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g06010.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g25990.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os05g19600.1 No alias alpha-class expansin 0.02 LandPlants
MA_10020g0010 No alias alpha-class expansin 0.02 LandPlants
MA_10433559g0020 No alias alpha-class expansin 0.02 LandPlants
MA_184474g0010 No alias alpha-class expansin 0.03 LandPlants
MA_37884g0010 No alias alpha-class expansin 0.03 LandPlants
MA_474624g0010 No alias alpha-class expansin 0.02 LandPlants
MA_4979g0010 No alias alpha-class expansin 0.03 LandPlants
Mp1g24230.1 No alias alpha-class expansin 0.03 LandPlants
Zm00001e017221_P001 No alias alpha-class expansin 0.02 LandPlants
Gb_01502 No alias alpha-class expansin 0.02 SeedPlants
Gb_01504 No alias alpha-class expansin 0.04 SeedPlants
Gb_01505 No alias alpha-class expansin 0.03 SeedPlants
Gb_06127 No alias alpha-class expansin 0.02 SeedPlants
Gb_07437 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 SeedPlants
MA_10020g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_10433559g0020 No alias alpha-class expansin 0.02 SeedPlants
MA_184474g0010 No alias alpha-class expansin 0.01 SeedPlants
MA_37884g0010 No alias alpha-class expansin 0.03 SeedPlants
MA_474624g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_4979g0010 No alias alpha-class expansin 0.03 SeedPlants
Zm00001e011741_P001 No alias alpha-class expansin 0.02 SeedPlants
Zm00001e017221_P001 No alias alpha-class expansin 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 168 245
IPR009009 RlpA-like_DPBB 68 157
No external refs found!