Solyc06g034140.3.1


Description : transcription factor (REM)


Gene families : OG_01_0000741 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000741_tree ,
OG_02_0012196 (LandPlants) Phylogenetic Tree(s): OG_02_0012196_tree ,
OG_03_0010997 (SeedPlants) Phylogenetic Tree(s): OG_03_0010997_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g034140.3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.05 Archaeplastida
AT1G49480 RTV1 related to vernalization1 1 0.04 Archaeplastida
AT3G19184 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.09 Archaeplastida
Gb_07025 No alias transcription factor (REM) 0.03 Archaeplastida
Gb_35990 No alias transcription factor (REM) 0.03 Archaeplastida
LOC_Os03g08620.1 No alias transcription factor (REM) 0.1 Archaeplastida
MA_10433064g0010 No alias transcription factor (REM) 0.08 Archaeplastida
MA_430451g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_59943g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Mp2g08790.1 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c14_21500V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c17_16170V3.1 No alias AP2/B3-like transcriptional factor family protein 0.04 Archaeplastida
Pp3c1_15410V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c7_12680V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Solyc01g108130.4.1 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e000624_P003 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e020584_P001 No alias transcription factor (REM) 0.07 Archaeplastida
Zm00001e040028_P004 No alias transcription factor (REM) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 84 174
No external refs found!