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  5. Solyc06g009390.3.1

Solyc06g009390.3.1


Description : transcription factor (DBP)


Gene families : OG_01_0000802 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000802_tree ,
OG_02_0009795 (LandPlants) Phylogenetic Tree(s): OG_02_0009795_tree ,
OG_03_0007014 (SeedPlants) Phylogenetic Tree(s): OG_03_0007014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g009390.3.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.03 Archaeplastida
AMTR_s00122p00108900 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.03 Archaeplastida
AT3G62260 No alias Protein phosphatase 2C family protein 0.03 Archaeplastida
GSVIVT01017639001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.03 Archaeplastida
GSVIVT01028192001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.05 Archaeplastida
Gb_16142 No alias transcription factor (DBP). clade G phosphatase 0.05 Archaeplastida
Gb_40616 No alias transcription factor (DBP). clade G phosphatase 0.02 Archaeplastida
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.04 Archaeplastida
LOC_Os05g04360.1 No alias transcription factor (DBP) 0.03 Archaeplastida
MA_10426899g0020 No alias transcription factor (DBP) 0.01 Archaeplastida
MA_13571g0010 No alias transcription factor (DBP). clade G phosphatase 0.03 Archaeplastida
MA_185497g0010 No alias transcription factor (DBP). clade G phosphatase 0.04 Archaeplastida
Mp6g03430.1 No alias transcription factor (DBP) 0.02 Archaeplastida
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Solyc07g007220.3.1 No alias transcription factor (DBP) 0.04 Archaeplastida
Zm00001e040337_P001 No alias transcription factor (DBP) 0.03 Archaeplastida
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.02 LandPlants
GSVIVT01028192001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.03 LandPlants
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.02 LandPlants
LOC_Os05g04360.1 No alias transcription factor (DBP) 0.03 LandPlants
Zm00001e025432_P001 No alias transcription factor (DBP) 0.02 LandPlants
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.02 SeedPlants
GSVIVT01028192001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 53 305
No external refs found!