Solyc06g008490.3.1


Description : histone demethylase (PKDM7). transcription factor (JUMONJI)


Gene families : OG_01_0001111 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001111_tree ,
OG_02_0001701 (LandPlants) Phylogenetic Tree(s): OG_02_0001701_tree ,
OG_03_0001587 (SeedPlants) Phylogenetic Tree(s): OG_03_0001587_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008490.3.1
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.05 Archaeplastida
GSVIVT01019761001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.03 Archaeplastida
LOC_Os05g10770.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida
LOC_Os05g23670.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida
LOC_Os06g51490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013363_P002 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.03 Archaeplastida
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.04 LandPlants
LOC_Os05g10770.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 LandPlants
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.04 SeedPlants
LOC_Os05g10770.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003347 JmjC_dom 381 495
IPR004198 Znf_C5HC2 602 654
IPR003349 JmjN 141 174
No external refs found!