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  5. Solyc06g007530.2.1

Solyc06g007530.2.1


Description : transcription factor (REM)


Gene families : OG_01_0000741 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000741_tree ,
OG_02_0001199 (LandPlants) Phylogenetic Tree(s): OG_02_0001199_tree ,
OG_03_0001296 (SeedPlants) Phylogenetic Tree(s): OG_03_0001296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007530.2.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.06 Archaeplastida
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.06 Archaeplastida
Gb_07025 No alias transcription factor (REM) 0.06 Archaeplastida
Gb_35990 No alias transcription factor (REM) 0.04 Archaeplastida
LOC_Os03g08620.1 No alias transcription factor (REM) 0.04 Archaeplastida
LOC_Os05g40280.1 No alias transcription factor (REM) 0.03 Archaeplastida
Mp2g08790.1 No alias transcription factor (REM) 0.03 Archaeplastida
Pp3c14_19410V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c17_16150V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c21_16260V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
Zm00001e000624_P003 No alias transcription factor (REM) 0.06 Archaeplastida
Zm00001e020584_P001 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e040028_P004 No alias transcription factor (REM) 0.02 Archaeplastida
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 LandPlants
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.06 LandPlants
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 LandPlants
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 LandPlants
Gb_07025 No alias transcription factor (REM) 0.06 LandPlants
Gb_35990 No alias transcription factor (REM) 0.04 LandPlants
LOC_Os03g08620.1 No alias transcription factor (REM) 0.04 LandPlants
LOC_Os05g40280.1 No alias transcription factor (REM) 0.03 LandPlants
Mp2g08790.1 No alias transcription factor (REM) 0.03 LandPlants
Pp3c14_19410V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants
Pp3c17_16150V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants
Pp3c21_16260V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.03 LandPlants
Zm00001e000624_P003 No alias transcription factor (REM) 0.06 LandPlants
Zm00001e020584_P001 No alias transcription factor (REM) 0.03 LandPlants
Zm00001e040028_P004 No alias transcription factor (REM) 0.02 LandPlants
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 SeedPlants
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.06 SeedPlants
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 SeedPlants
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 SeedPlants
Gb_07025 No alias transcription factor (REM) 0.06 SeedPlants
Gb_35990 No alias transcription factor (REM) 0.04 SeedPlants
LOC_Os03g08620.1 No alias transcription factor (REM) 0.04 SeedPlants
LOC_Os05g40280.1 No alias transcription factor (REM) 0.03 SeedPlants
Zm00001e000624_P003 No alias transcription factor (REM) 0.06 SeedPlants
Zm00001e020584_P001 No alias transcription factor (REM) 0.03 SeedPlants
Zm00001e040028_P004 No alias transcription factor (REM) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 141 231
No external refs found!