Solyc06g005550.3.1


Description : IDN/IDP regulatory protein of DNA methylation pathway


Gene families : OG_01_0000867 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000867_tree ,
OG_02_0000555 (LandPlants) Phylogenetic Tree(s): OG_02_0000555_tree ,
OG_03_0000747 (SeedPlants) Phylogenetic Tree(s): OG_03_0000747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g005550.3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G13790 No alias XH/XS domain-containing protein 0.03 Archaeplastida
AT4G01180 No alias XH/XS domain-containing protein 0.03 Archaeplastida
GSVIVT01010892001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
LOC_Os01g03570.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.03 Archaeplastida
LOC_Os02g19130.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 Archaeplastida
MA_16249g0010 No alias Factor of DNA methylation 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9285293g0010 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.03 Archaeplastida
Zm00001e004948_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g03570.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.03 LandPlants
MA_16249g0010 No alias Factor of DNA methylation 1 OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c21_20330V3.1 No alias XH/XS domain-containing protein 0.02 LandPlants
Zm00001e004948_P002 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e017043_P001 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 LandPlants
AMTR_s00012p00226630 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.01 SeedPlants
AT1G13790 No alias XH/XS domain-containing protein 0.02 SeedPlants
LOC_Os01g03570.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 SeedPlants
Zm00001e004948_P002 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005379 Uncharacterised_XH 522 649
IPR005380 XS_domain 114 225
IPR005381 Znf-XS_domain 41 83
No external refs found!