AMTR_s00009p00181330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.113

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit


Gene families : OG_01_0002576 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002576_tree ,
OG_02_0002369 (LandPlants) Phylogenetic Tree(s): OG_02_0002369_tree ,
OG_03_0004592 (SeedPlants) Phylogenetic Tree(s): OG_03_0004592_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00181330
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
MA_10427845g0010 No alias large subunit of TFIIa basal transcription factor complex 0.02 Archaeplastida
Zm00001e031330_P001 No alias large subunit of TFIIa basal transcription factor complex 0.03 Archaeplastida
MA_10427845g0010 No alias large subunit of TFIIa basal transcription factor complex 0.02 LandPlants
Smo430900 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 LandPlants
Zm00001e031330_P001 No alias large subunit of TFIIa basal transcription factor complex 0.03 LandPlants
MA_10427845g0010 No alias large subunit of TFIIa basal transcription factor complex 0.02 SeedPlants
Zm00001e031330_P001 No alias large subunit of TFIIa basal transcription factor complex 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005672 transcription factor TFIIA complex IEA Interproscan
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004855 TFIIA_asu/bsu 8 169
No external refs found!