Solyc05g056140.4.1


Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 218.0)


Gene families : OG_01_0000379 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000379_tree ,
OG_02_0000514 (LandPlants) Phylogenetic Tree(s): OG_02_0000514_tree ,
OG_03_0001859 (SeedPlants) Phylogenetic Tree(s): OG_03_0001859_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g056140.4.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Archaeplastida
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os04g01160.1 No alias ubiquitin protein ligase (WAV3) 0.02 Archaeplastida
MA_129331g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_958082g0010 No alias No annotation 0.02 Archaeplastida
Zm00001e012729_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e016170_P004 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023647_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e040461_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041206_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 LandPlants
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 LandPlants
LOC_Os03g04890.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_129331g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 LandPlants
Smo141910 No alias No description available 0.01 LandPlants
Zm00001e016170_P004 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e023647_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e041206_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e016170_P004 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 SeedPlants
Zm00001e023647_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 81 110
IPR002035 VWF_A 278 462
IPR032838 Vwaint_dom 629 701
No external refs found!