AMTR_s00009p00180870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.112

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit


Gene families : OG_01_0002576 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002576_tree ,
OG_02_0002369 (LandPlants) Phylogenetic Tree(s): OG_02_0002369_tree ,
OG_03_0013753 (SeedPlants) Phylogenetic Tree(s): OG_03_0013753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00180870
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000880.24 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Zm00001e031330_P001 No alias large subunit of TFIIa basal transcription factor complex 0.02 LandPlants

Type GO Term Name Evidence Source
CC GO:0005672 transcription factor TFIIA complex IEA Interproscan
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004855 TFIIA_asu/bsu 36 178
No external refs found!