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  5. Solyc05g054600.3.1

Solyc05g054600.3.1


Description : methionine-tRNA ligase


Gene families : OG_01_0004966 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004966_tree ,
OG_02_0007771 (LandPlants) Phylogenetic Tree(s): OG_02_0007771_tree ,
OG_03_0007336 (SeedPlants) Phylogenetic Tree(s): OG_03_0007336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054600.3.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00101170 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
AT3G55400 OVA1 methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.02 Archaeplastida
Cpa|evm.model.tig00020675.1 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cre12.g487100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.08 Archaeplastida
GSVIVT01016575001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.1 Archaeplastida
Gb_24980 No alias Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.07 Archaeplastida
LOC_Os03g11120.1 No alias methionine-tRNA ligase 0.11 Archaeplastida
MA_10432167g0010 No alias methionine-tRNA ligase 0.05 Archaeplastida
Mp2g16770.1 No alias methionine-tRNA ligase 0.08 Archaeplastida
Pp3c15_23530V3.1 No alias methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.08 Archaeplastida
Smo154280 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.07 Archaeplastida
Zm00001e000706_P004 No alias methionine-tRNA ligase 0.08 Archaeplastida
AMTR_s00058p00101170 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 LandPlants
AT3G55400 OVA1 methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.02 LandPlants
GSVIVT01016575001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.1 LandPlants
Gb_24980 No alias Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.06 LandPlants
LOC_Os03g11120.1 No alias methionine-tRNA ligase 0.1 LandPlants
MA_10432167g0010 No alias methionine-tRNA ligase 0.03 LandPlants
Mp2g16770.1 No alias methionine-tRNA ligase 0.06 LandPlants
Pp3c15_23530V3.1 No alias methionyl-tRNA synthetase / methionine--tRNA ligase /... 0.08 LandPlants
Smo154280 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 LandPlants
Zm00001e000706_P004 No alias methionine-tRNA ligase 0.08 LandPlants
AMTR_s00058p00101170 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 SeedPlants
GSVIVT01016575001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.09 SeedPlants
Gb_24980 No alias Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.04 SeedPlants
LOC_Os03g11120.1 No alias methionine-tRNA ligase 0.1 SeedPlants
MA_10432167g0010 No alias methionine-tRNA ligase 0.03 SeedPlants
Zm00001e000706_P004 No alias methionine-tRNA ligase 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 212 439
IPR002300 aa-tRNA-synth_Ia 77 203
No external refs found!