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  5. Solyc05g053290.3.1

Solyc05g053290.3.1


Description : transcription factor (DBP)


Gene families : OG_01_0000802 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000802_tree ,
OG_02_0109089 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0086918 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053290.3.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.02 Archaeplastida
AT3G62260 No alias Protein phosphatase 2C family protein 0.04 Archaeplastida
GSVIVT01017639001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.03 Archaeplastida
GSVIVT01028192001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.03 Archaeplastida
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 115 367
No external refs found!