1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g052910.4.1

Solyc05g052910.4.1


Description : ubiquitin receptor regulatory protein (DA1)


Gene families : OG_01_0000922 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000922_tree ,
OG_02_0001189 (LandPlants) Phylogenetic Tree(s): OG_02_0001189_tree ,
OG_03_0001092 (SeedPlants) Phylogenetic Tree(s): OG_03_0001092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052910.4.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT5G66620 DAR6 DA1-related protein 6 0.03 Archaeplastida
AT5G66640 DAR3 DA1-related protein 3 0.03 Archaeplastida
GSVIVT01016461001 No alias Protein DA1-related 2 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_39736 No alias Protein DA1-related 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g42820.2 No alias ubiquitin receptor regulatory protein (DA1) 0.03 Archaeplastida
LOC_Os12g40490.1 No alias ubiquitin receptor regulatory protein (DA1) 0.06 Archaeplastida
Pp3c1_8550V3.1 No alias LIM domain-containing protein 0.03 Archaeplastida
Smo132792 No alias Protein DA1-related 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g089930.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g079910.3.1 No alias ubiquitin receptor regulatory protein (DA1) 0.03 Archaeplastida
Solyc04g079840.4.1 No alias ubiquitin receptor regulatory protein (DA1) 0.04 Archaeplastida
Zm00001e029774_P002 No alias ubiquitin receptor regulatory protein (DA1) 0.02 Archaeplastida
GSVIVT01016461001 No alias Protein DA1-related 2 OS=Arabidopsis thaliana 0.08 LandPlants
LOC_Os03g42820.2 No alias ubiquitin receptor regulatory protein (DA1) 0.03 LandPlants
LOC_Os12g40490.1 No alias ubiquitin receptor regulatory protein (DA1) 0.06 LandPlants
Pp3c1_8550V3.1 No alias LIM domain-containing protein 0.03 LandPlants
Solyc02g089930.4.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc03g079910.3.1 No alias ubiquitin receptor regulatory protein (DA1) 0.03 LandPlants
Solyc04g079840.4.1 No alias ubiquitin receptor regulatory protein (DA1) 0.04 LandPlants
Zm00001e029774_P002 No alias ubiquitin receptor regulatory protein (DA1) 0.02 LandPlants
GSVIVT01016461001 No alias Protein DA1-related 2 OS=Arabidopsis thaliana 0.09 SeedPlants
LOC_Os03g16090.1 No alias ubiquitin receptor regulatory protein (DA1) 0.02 SeedPlants
LOC_Os12g40490.1 No alias ubiquitin receptor regulatory protein (DA1) 0.04 SeedPlants
MA_171674g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc02g089930.4.1 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc04g079840.4.1 No alias ubiquitin receptor regulatory protein (DA1) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001781 Znf_LIM 141 179
IPR022087 DA1-like 290 498
No external refs found!