1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g052850.3.1

Solyc05g052850.3.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000157 (SeedPlants) Phylogenetic Tree(s): OG_03_0000157_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052850.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00029p00183640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.01 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.02 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.01 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.01 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.02 Archaeplastida
AT2G25230 MYB100, AtMYB100 myb domain protein 100 0.02 Archaeplastida
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.01 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.01 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.02 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.01 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.01 Archaeplastida
AT4G00540 ATMYB3R2,... myb domain protein 3r2 0.05 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.01 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.01 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.02 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.01 Archaeplastida
AT4G25560 AtMYB18, MYB18 myb domain protein 18 0.02 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.02 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.02 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.01 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.02 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.01 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.01 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.02 Archaeplastida
AT5G59780 ATMYB59-1,... myb domain protein 59 0.04 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.02 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.02 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027811001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01033418001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01036802001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50720.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g49986.1 No alias transcription factor (MYB) 0.09 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os03g26130.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os03g29614.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g39470.1 No alias transcription factor (MYB). transcriptional key... 0.01 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os04g46384.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g45740.1 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14061g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_199974g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.12 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_95226g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.01 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Pp3c19_20750V3.1 No alias myb domain protein 20 0.03 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.01 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g093940.2.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g112390.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007160.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.01 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc11g072060.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e002893_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e017470_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020371_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e022280_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
AMTR_s00029p00183640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.01 LandPlants
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 LandPlants
Gb_01889 No alias transcription factor (MYB) 0.01 LandPlants
Pp3c6_24650V3.1 No alias myb domain protein 109 0.01 LandPlants
AMTR_s00029p00183640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 47 92
IPR001005 SANT/Myb 99 142
No external refs found!