Solyc05g026130.3.1


Description : small subunit sigma of AP-4 vacuole cargo adaptor complex


Gene families : OG_01_0000560 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000560_tree ,
OG_02_0007286 (LandPlants) Phylogenetic Tree(s): OG_02_0007286_tree ,
OG_03_0008306 (SeedPlants) Phylogenetic Tree(s): OG_03_0008306_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g026130.3.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00186170 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
AT3G50860 No alias Clathrin adaptor complex small chain family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001003.32 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Cre09.g394100 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 Archaeplastida
GSVIVT01009900001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01028912001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Gb_05592 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
LOC_Os10g22330.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.05 Archaeplastida
LOC_Os12g10560.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.06 Archaeplastida
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
Pp3c9_6760V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Smo271913 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
Zm00001e005895_P003 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Zm00001e018362_P003 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.08 Archaeplastida
LOC_Os10g22330.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.04 LandPlants
Mp6g09610.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 LandPlants
Pp3c14_14670V3.1 No alias SNARE-like superfamily protein 0.02 LandPlants
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.08 LandPlants
LOC_Os10g22330.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.04 SeedPlants
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.08 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 3 142
No external refs found!