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  5. AT1G73710

AT1G73710


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0003733 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003733_tree ,
OG_02_0003722 (LandPlants) Phylogenetic Tree(s): OG_02_0003722_tree ,
OG_03_0003603 (SeedPlants) Phylogenetic Tree(s): OG_03_0003603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G73710
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00261700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73710... 0.03 Archaeplastida
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_10426616g0010 No alias Pentatricopeptide repeat-containing protein At1g73710... 0.05 Archaeplastida
Solyc09g083110.3.1 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.05 Archaeplastida
AMTR_s00002p00268520 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g23020... 0.02 LandPlants
Gb_11434 No alias Pentatricopeptide repeat-containing protein At1g73710... 0.02 LandPlants
MA_10426616g0010 No alias Pentatricopeptide repeat-containing protein At1g73710... 0.05 LandPlants
Solyc09g083110.3.1 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.04 LandPlants
AMTR_s00002p00268520 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g23020... 0.02 SeedPlants
GSVIVT01018090001 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.02 SeedPlants
Gb_11434 No alias Pentatricopeptide repeat-containing protein At1g73710... 0.02 SeedPlants
MA_10426616g0010 No alias Pentatricopeptide repeat-containing protein At1g73710... 0.05 SeedPlants
Solyc09g083110.3.1 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 514 561
IPR002885 Pentatricopeptide_repeat 339 383
IPR002885 Pentatricopeptide_repeat 864 903
IPR002885 Pentatricopeptide_repeat 587 631
IPR002885 Pentatricopeptide_repeat 143 192
IPR002885 Pentatricopeptide_repeat 726 755
IPR002885 Pentatricopeptide_repeat 306 336
IPR002885 Pentatricopeptide_repeat 694 720
IPR002885 Pentatricopeptide_repeat 658 684
IPR002885 Pentatricopeptide_repeat 761 786
No external refs found!