AT1G73030 (CHMP1A, VPS46.2)


Aliases : CHMP1A, VPS46.2

Description : SNF7 family protein


Gene families : OG_01_0002047 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002047_tree ,
OG_02_0002010 (LandPlants) Phylogenetic Tree(s): OG_02_0002010_tree ,
OG_03_0002531 (SeedPlants) Phylogenetic Tree(s): OG_03_0002531_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G73030
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00206680 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 Archaeplastida
Cre03.g188500 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 Archaeplastida
GSVIVT01016898001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Gb_40149 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 Archaeplastida
LOC_Os06g43590.2 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.07 Archaeplastida
MA_6597368g0010 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.04 Archaeplastida
Solyc03g121360.1.1 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.05 Archaeplastida
AMTR_s00036p00206680 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 LandPlants
GSVIVT01016898001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 LandPlants
Gb_09411 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.02 LandPlants
Gb_40149 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 LandPlants
LOC_Os06g43590.2 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.04 LandPlants
MA_6597368g0010 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.04 LandPlants
Mp5g17770.1 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.02 LandPlants
Solyc03g121360.1.1 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.04 LandPlants
AMTR_s00036p00206680 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 SeedPlants
GSVIVT01016898001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 SeedPlants
Gb_09411 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.02 SeedPlants
Gb_40149 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 SeedPlants
LOC_Os06g43590.2 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 SeedPlants
MA_6597368g0010 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.04 SeedPlants
Solyc03g121360.1.1 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000578 embryonic axis specification IGI Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009793 embryo development ending in seed dormancy IGI Interproscan
BP GO:0010286 heat acclimation RCA Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IGI Interproscan
BP GO:0040007 growth IGI Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 172
No external refs found!