Solyc05g008390.3.1


Description : RING-v-class E3 ligase


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0008056 (SeedPlants) Phylogenetic Tree(s): OG_03_0008056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g008390.3.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Gb_37740 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc01g079530.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Gb_37740 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.03 LandPlants
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022143 DUF3675 109 227
IPR011016 Znf_RING-CH 58 103
No external refs found!