Solyc05g007070.2.1


Description : alpha amylase


Gene families : OG_01_0000584 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000584_tree ,
OG_02_0011420 (LandPlants) Phylogenetic Tree(s): OG_02_0011420_tree ,
OG_03_0011504 (SeedPlants) Phylogenetic Tree(s): OG_03_0011504_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007070.2.1
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00183740 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT1G76130 AMY2, ATAMY2 alpha-amylase-like 2 0.03 Archaeplastida
Cre08.g384750 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Cre08.g385500 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
Gb_04800 No alias alpha amylase 0.02 Archaeplastida
Gb_04803 No alias alpha amylase 0.02 Archaeplastida
Gb_18574 No alias alpha amylase 0.02 Archaeplastida
LOC_Os02g52710.1 No alias alpha amylase 0.02 Archaeplastida
Pp3c4_15970V3.1 No alias alpha-amylase-like 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 832 890
IPR006047 Glyco_hydro_13_cat_dom 528 781
No external refs found!