Solyc04g082470.3.1


Description : LWD circadian clock activation factor


Gene families : OG_01_0001679 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001679_tree ,
OG_02_0001586 (LandPlants) Phylogenetic Tree(s): OG_02_0001586_tree ,
OG_03_0001588 (SeedPlants) Phylogenetic Tree(s): OG_03_0001588_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082470.3.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032940001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g32430.1 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c19_21960V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Zm00001e014684_P001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e015450_P001 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.03 Archaeplastida
GSVIVT01032940001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis thaliana 0.02 LandPlants
LOC_Os02g32430.1 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 LandPlants
LOC_Os02g45810.1 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.02 LandPlants
Pp3c19_21960V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
Zm00001e014684_P001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.04 LandPlants
Zm00001e015450_P001 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.03 LandPlants
GSVIVT01032940001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis thaliana 0.02 SeedPlants
Zm00001e014684_P001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.04 SeedPlants
Zm00001e015450_P001 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 264 297
IPR001680 WD40_repeat 175 206
No external refs found!