Solyc04g082400.3.1


Description : starch branching enzyme


Gene families : OG_01_0001006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001006_tree ,
OG_02_0002115 (LandPlants) Phylogenetic Tree(s): OG_02_0002115_tree ,
OG_03_0011285 (SeedPlants) Phylogenetic Tree(s): OG_03_0011285_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082400.3.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.19 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Cre06.g270100 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Zm00001e013321_P002 No alias starch branching enzyme 0.03 Archaeplastida
AT5G03650 SBE2.2 starch branching enzyme 2.2 0.02 LandPlants
GSVIVT01033801001 No alias Carbohydrate metabolism.starch... 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 679 777
IPR004193 Glyco_hydro_13_N 142 225
IPR006047 Glyco_hydro_13_cat_dom 313 373
No external refs found!