Solyc04g081920.3.1


Description : dual-specificity tRNA/rRNA pseudouridine synthase (RluA)


Gene families : OG_01_0004055 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004055_tree ,
OG_02_0004423 (LandPlants) Phylogenetic Tree(s): OG_02_0004423_tree ,
OG_03_0004106 (SeedPlants) Phylogenetic Tree(s): OG_03_0004106_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g081920.3.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT1G76050 No alias Pseudouridine synthase family protein 0.04 Archaeplastida
Cre02.g078750 No alias RNA processing.RNA... 0.02 Archaeplastida
LOC_Os06g50360.1 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 Archaeplastida
MA_8643219g0010 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.02 Archaeplastida
Zm00001e030166_P001 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 Archaeplastida
AT1G76050 No alias Pseudouridine synthase family protein 0.04 LandPlants
LOC_Os06g50360.1 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 LandPlants
Zm00001e030166_P001 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 LandPlants
AT1G76050 No alias Pseudouridine synthase family protein 0.04 SeedPlants
LOC_Os06g50360.1 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 SeedPlants
MA_10436542g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e030166_P001 No alias dual-specificity tRNA/rRNA pseudouridine synthase (RluA) 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 72 118
IPR006145 PsdUridine_synth_RsuA/RluA 145 342
No external refs found!